SecStrAPI is a service providing annotation of secondary structure elements in protein structures.
Name | Description |
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pdbId | PDB ID of the entry (e.g. 1tqn). |
File | Description |
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secstrapi_plugin-1.4.py |
This PyMOL plugin can be used to download annotations from this API and visualize them directly in PyMOL.
Install via Plugin Manager or type
run https://webchem.ncbr.muni.cz/API/SecStr/Downloads/secstrapi_plugin.py. Example of usage: annotate_sec_str 1og5 and chain A (Fetches the structure of 1og5 and annotates its chain A using annotation from SecStrAPI.) annotate_sec_str 1og5 and chain A, my_annotations/1og5.sses.json (Does the same, but uses annotation from the specified file instead of the one from SecStrAPI.) annotate_sec_str 1og5A (Fetches the structure of 1og5 and annotates domain 1og5A (~ chain A).) |
SecStrAPI-CytochromesP450-20200707.zip | All available annotations |