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ValidatorDB:Database organization

209 bytes added, 15:56, 3 September 2014
Custom search
==Custom search==
[[File:VDB_Custom.PNG|thumb|right|650px|The '''Custom search tab''' Search the database allows to retrieve validation reports for validation results corresponding specific molecules, according to specific annotation (3-letter code) and PDB entries and molecules of interestentry.]]
The In addition to the predefined summaries and reports already described, '''ValidatorDB''' can generate custom validation reports using the '''Custom Search''' tab allows functionality. Such custom validator reports allow you to create your own view better focus on molecules of the ligands validation of the interest (drug molecules, polycyclic molecules, etc.), from relevant PDB databaseentries (entries with a resolution higher than 2 Å, published after 2010, etc.).
In addition to the predefined summaries and reports already described, '''ValidatorDB''' can generate custom validation reports. You may specify a set of molecules using PDB IDs (4-letter codes) and annotations (3-letter codes). The validation results for these molecules are then retrieved from '''ValidatorDB'''Alternatively, organized and made accessible in you may prefer to use the same manner as advanced search functions available on the entire database (). The only difference is that the overall statistics will refer Protein Data Bank web page, in order to the your selection, generate a list of relevant annotations and not to the entire PDBIDs. Such custom reports allow you Instructions on how to better focus on molecules of interest (drug molecules, polycyclic molecules, etc.), from relevant PDB entries (entries with achieve this are included in the web page as a resolution higher than 2 Å, published after 2010, etc.)tool tip.
The validation results for the molecules you specified are then retrieved from '''ValidatorDB''', organized and made accessible in the same manner as the above described tabs . The only difference is that the statistics will refer to your selection, and not to the entire PDB.

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